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A BGC-Argo Guide: Planning, Deployment, Data Handling and Usage ArchiMer
Bittig, Henry C.; Maurer, Tanya L.; Plant, Joshua N.; Schmechtig, Catherine; Wong, Annie P. S.; Claustre, Hervé; Trull, Thomas W.; Udaya Bhaskar, T. V. S.; Boss, Emmanuel; Dall’olmo, Giorgio; Organelli, Emanuele; Poteau, Antoine; Johnson, Kenneth S.; Hanstein, Craig; Leymarie, Edouard; Le Reste, Serge; Riser, Stephen C.; Rupan, A. Rick; Taillandier, Vincent; Thierry, Virginie; Xing, Xiaogang.
The Biogeochemical-Argo program (BGC-Argo) is a new profiling-float-based, ocean wide, and distributed ocean monitoring program which is tightly linked to, and has benefited significantly from, the Argo program. The community has recommended for BGC-Argo to measure six additional properties in addition to pressure, temperature and salinity measured by Argo, to include oxygen, pH, nitrate, downwelling light, chlorophyll fluorescence and the optical backscattering coefficient. The purpose of this addition is to enable the monitoring of ocean biogeochemistry and health, and in particular, monitor major processes such as ocean deoxygenation, acidification and warming and their effect on phytoplankton, the main source of energy of marine ecosystems. Here we...
Tipo: Text Palavras-chave: Ocean observation; Ocean biogeochemical cycles; Sensors; Carbon cycle; Ocean optics; Best practices; Argo.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00512/62344/66607.pdf
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Application file for renewal of the 'National Observation Service' label (INSU/CNRS) 2020-2024: SNO Argo-France ArchiMer
Kolodziejczyk, Nicolas; Cabanes, Cecile; D'Ortenzio, Fabrizio; Maze, Guillaume; Pouliquen, Sylvie; Poteau, Antoine; Schmechtig, Catherine; Thierry, Virginie.
Application file for renewal of labeling as National Observation Service of SNO Argo-France with INSU for the period 2020-2024. This document presents the results of SNO Argo France's activities over the 2015-2019 labeling period; and sets targets for the period 2020-2024.
Tipo: Text
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00499/61055/64484.pdf
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Argo quality control manual for biogeochemical data ArchiMer
Schmechtig, Catherine; Thierry, Virginie; The Bio Argo Team,.
This document is the Argo quality control manual for biogeochemical data. It describes two levels of quality control: • The first level is the real-time system that performs a set of agreed automatic checks. • The second level is the delayed-mode quality control system.
Tipo: Text
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00298/40879/42267.pdf
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Assessing the Variability in the Relationship Between the Particulate Backscattering Coefficient and the Chlorophyll a Concentration From a Global Biogeochemical-Argo Database ArchiMer
Barbieux, Marie; Uitz, Julia; Bricaud, Annick; Organelli, Emanuele; Poteau, Antoine; Schmechtig, Catherine; Gentili, Bernard; Obolensky, Grigor; Leymarie, Edouard; Penkerc'H, Christophe; D'Ortenzio, Fabrizio; Claustre, Herve.
Characterizing phytoplankton distribution and dynamics in the world's open oceans requires in situ observations over a broad range of space and time scales. In addition to temperature/salinity measurements, Biogeochemical-Argo (BGC-Argo) profiling floats are capable of autonomously observing at high-frequency bio-optical properties such as the chlorophyll fluorescence, a proxy of the chlorophyll a concentration (Chla), the particulate backscattering coefficient (b(bp)), a proxy of the stock of particulate organic carbon, and the light available for photosynthesis. We analyzed an unprecedented BGC-Argo database of more than 8,500 multivariable profiles collected in various oceanic conditions, from subpolar waters to subtropical gyres. Our objective is to...
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Ano: 2018 URL: https://archimer.ifremer.fr/doc/00673/78495/80780.pdf
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BGC Argo quality control manual for particles backscattering ArchiMer
Schmechtig, Catherine; Boss, Emmanuel; Briggs, Nathan; Claustre, Herve; Dall'Olmo, Giorgio; Poteau, Antoine.
This document is the BGC-Argo quality control manual for particles backscattering. It describes the method used in real-time to apply quality control flags to particles backscattering calculated from specific sensors mounted on Argo profiling floats.
Tipo: Text Palavras-chave: Argo; Physical oceanography; In-situ marine data; Profiling floats; Bbp; Operational oceanography; Biogeochemistry.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00491/60262/63668.pdf
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Bio-Argo floats : Data management in progress... ArchiMer
Schmechtig, Catherine; Poteau, Antoine; Claustre, Herve; D'Ortenzio, Fabrizio; Buck, Justin; Carval, Thierry.
In the context of the Bio-Argo program, a significant number of "new" biogeochemical variables are now candidate to be delivered through the Argo data stream. These variables are nitrate concentration, dissolved oxygen concentration, Chla concentration, backscattering coefficient, pH and radiometric data. Compared to the core Argo mission (P, T and 5), this diversity of new variable forces the community of biogeochemists to be very careful with respect to data management. Since three years, the community of biogeochemists thus actively participate to Argo data management meetings, in order to develop procedure for biogeochemical data compliant with Argo requirements regarding distribution policy, format, quality assessment and documentation. We illustrate...
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Ano: 2015 URL: http://archimer.ifremer.fr/doc/00254/36542/35084.pdf
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Bio-Argo quality control manual for the Chlorophyll-A concentration ArchiMer
Schmechtig, Catherine; Claustre, Herve; Poteau, Antoine; D'Ortenzio, Fabrizio.
This document is the bio-Argo quality control manual for Chlorophyll A concentration. It describes the method used in real-time to apply quality control flags to Chlorophyll A concentration calculated from specific sensors mounted on Argo profiling floats.
Tipo: Text Palavras-chave: Argo; Physical oceanography; In-situ marine data; Profiling floats; Chlorophyll; Operational oceanography; Biogeochemistry.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00243/35385/60181.pdf
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Enhancement of phytoplankton biomass leeward of Tahiti as observed by Biogeochemical-Argo floats ArchiMer
Sauzède, Raphaëlle; Martinez, Elodie; Maes, Christophe; De Fommervault, Orens Pasqueron; Poteau, Antoine; Mignot, Alexandre; Claustre, Hervé; Uitz, Julia; Oziel, Laurent; Maamaatuaiahutapu, Keitapu; Rodier, Martine; Schmechtig, Catherine; Laurent, Victoire.
The South Pacific Subtropical Gyre (SPSG) is a vast and remote oceanic system where the variability in phytoplankton biomass and production is still largely uncertain due to the lack of in situ biogeochemical observations. The SPSG is an oligotrophic environment where the ecosystem is controlled predominantly by nutrient depletion in surface waters. However, this dynamic is altered in the vicinity of islands where increased biological activity occurs (i.e. the island mass effect, IME). This study mainly focuses on in situ observations which show evidence of an IME leeward of Tahiti (17.7°S - 149.5°W), French Polynesia. Physical and biogeochemical observations collected with two Biogeochemical-Argo profiling floats are used to investigate the dynamics of...
Tipo: Text Palavras-chave: Phytoplankton biomass; Biogeochemical-Argo floats; Island mass effect; South Pacific Subtropical Gyre.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00599/71130/69445.pdf
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French National Report on Argo - 2016. Present status and future plans ArchiMer
Maze, Guillaume; Cabanes, Cecile; Carval, Thierry; Claustre, Hervé; Coatanoan, Christine; D'Ortenzio, Fabrizio; Kolodziejczyk, Nicolas; Lebreton, Nathanaele; Poteau, Antoine; Le Reste, Serge; Schmechtig, Catherine; Le Traon, Pierre-yves; Poffa, Noe; Pouliquen, Sylvie; Thierry, Virginie.
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Ano: 2017 URL: https://archimer.ifremer.fr/doc/00397/50844/51615.pdf
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French National Report on Argo - 2017 ArchiMer
Maze, Guillaume; Cabanes, Cecile; Carval, Thierry; Claustre, Hervé; Coatanoan, Christine; D'Ortenzio, Fabrizio; Kolodziejczyk, Nicolas; Lebreton, Nathanaele; Poteau, Antoine; Le Reste, Serge; Schmechtig, Catherine; Le Traon, Pierre-yves; Poffa, Noe; Pouliquen, Sylvie; Thierry, Virginie.
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Ano: 2018 URL: https://archimer.ifremer.fr/doc/00435/54642/56063.pdf
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French National Report on Argo - 2018 ArchiMer
Maze, Guillaume; Cabanes, Cecile; Carval, Thierry; Claustre, Hervé; Coatanoan, Christine; D'Ortenzio, Fabrizio; Kolodziejczyk, Nicolas; Lebreton, Nathanaele; Le Reste, Serge; Le Traon, Pierre-yves; Poteau, Antoine; Poffa, Noe; Pouliquen, Sylvie; Schmechtig, Catherine; Thierry, Virginie.
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Ano: 2019 URL: https://archimer.ifremer.fr/doc/00484/59523/62497.pdf
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French National Report on Argo - 2019 ArchiMer
Maze, Guillaume; Andre, Xavier; Cabanes, Cécile; Carval, Thierry; Claustre, Hervé; Coatanoan, Christine; D'Ortenzio, Fabrizio; Kolodziejczyk, Nicolas; Lebreton, Nathanaele; Le Traon, Pierre-yves; Poteau, Antoine; Poffa, Noe; Pouliquen, Sylvie; Sauzede, Raphaëlle; Schmechtig, Catherine; Thierry, Virginie.
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Ano: 2020 URL: https://archimer.ifremer.fr/doc/00620/73198/72392.pdf
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Hydrography and biogeochemistry dedicated to the Mediterranean BGC-Argo network during a cruise with RV Tethys 2 in May 2015 ArchiMer
Taillandier, Vincent; Wagener, Thibaut; D'Ortenzio, Fabrizio; Mayot, Nicolas; Legoff, Herve; Ras, Josephine; Coppola, Laurent; Pasqueron De Fommervault, Orens; Schmechtig, Catherine; Diamond, Emilie; Bittig, Henry; Lefevre, Dominique; Leymarie, Edouard; Poteau, Antoine; Prieur, Louis.
We report on data from an oceanographic cruise, covering western, central and eastern parts of the Mediterranean Sea, on the French research vessel Tethys 2 in May 2015. This cruise was fully dedicated to the maintenance and the metrological verification of a biogeochemical observing system based on a fleet of BGC-Argo floats. During the cruise, a comprehensive data set of parameters sensed by the autonomous network was collected. The measurements include ocean currents, seawater salinity and temperature, and concentrations of inorganic nutrients, dissolved oxygen and chlorophyll pigments. The analytical protocols and data processing methods are detailed, together with a first assessment of the calibration state for all the sensors deployed during the...
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Ano: 2018 URL: https://archimer.ifremer.fr/doc/00677/78943/81333.pdf
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Introduction to the French GEOTRACES North Atlantic Transect (GA01): GEOVIDE cruise ArchiMer
Sarthou, Geraldine; Lherminier, Pascale; Achterberg, Eric P.; Alonso-perez, Fernando; Bucciarelli, Eva; Boutorh, Julia; Bouvier, Vincent; Boyle, Edward A.; Branellec, Pierre; Carracedo, Lidia I.; Casacuberta, Nuria; Castrillejo, Maxi; Cheize, Marie; Pereira, Leonardo Contreira; Cossa, Daniel; Daniault, Nathalie; De Saint-leger, Emmanuel; Dehairs, Frank; Deng, Feifei; De Gesincourt, Floriane Desprez; Devesa, Jeremy; Foliot, Lorna; Fonseca-batista, Debany; Gallinari, Morgane; Garcia-ibanez, Maribel I.; Gourain, Arthur; Grossteffan, Emilie; Hamon, Michel; Heimburger, Lars Eric; Henderson, Gideon M.; Jeandel, Catherine; Kermabon, Catherine; Lacan, Francois; Le Bot, Philippe; Le Goff, Manon; Le Roy, Emilie; Lefebvre, Alison; Leizour, Stephane; Lemaitre, Nolwenn; Masque, Pere; Menage, Olivier; Barraqueta, Jan-lukas Menzel; Mercier, Herle; Perault, Fabien; Perez, Fiz F; Planquette, Helene; Planchon, Frederic; Roukaerts, Arnout; Sanial, Virginie; Sauzede, Raphaelle; Schmechtig, Catherine; Shelley, Rachel U.; Stewart, Gillian; Sutton, Jill; Tang, Yi; Tisnerat-laborde, Nadine; Tonnard, Manon; Treguer, Paul; Van Beek, Pieter; Zurbrick, Cheryl M.; Zunino Rodriguez, Patricia.
The GEOVIDE cruise, a collaborative project within the framework of the international GEOTRACES programme, was conducted along the French-led section in the North Atlantic Ocean (Section GA01), between 15 May and 30 June 2014. In this special issue (https://www.biogeosciences.net/special_ issue900.html), results from GEOVIDE, including physical oceanography and trace element and isotope cyclings, are presented among 18 articles. Here, the scientific context, project objectives, and scientific strategy of GEOVIDE are provided, along with an overview of the main results from the articles published in the special issue.
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Ano: 2018 URL: https://archimer.ifremer.fr/doc/00470/58178/60685.pdf
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On the Future of Argo: A Global, Full-Depth, Multi-Disciplinary Array ArchiMer
Roemmich, Dean; Alford, Matthew H.; Claustre, Hervé; Johnson, Kenneth; King, Brian; Moum, James; Oke, Peter; Owens, W. Brechner; Pouliquen, Sylvie; Purkey, Sarah; Scanderbeg, Megan; Suga, Toshio; Wijffels, Susan; Zilberman, Nathalie; Bakker, Dorothee; Baringer, Molly; Belbeoch, Mathieu; Bittig, Henry C.; Boss, Emmanuel; Calil, Paulo; Carse, Fiona; Carval, Thierry; Chai, Fei; Conchubhair, Diarmuid Ó.; D’ortenzio, Fabrizio; Dall’olmo, Giorgio; Desbruyeres, Damien; Fennel, Katja; Fer, Ilker; Ferrari, Raffaele; Forget, Gael; Freeland, Howard; Fujiki, Tetsuichi; Gehlen, Marion; Greenan, Blair; Hallberg, Robert; Hibiya, Toshiyuki; Hosoda, Shigeki; Jayne, Steven; Jochum, Markus; Johnson, Gregory C.; Kang, Kiryong; Kolodziejczyk, Nicolas; Körtzinger, Arne; Traon, Pierre-yves Le; Lenn, Yueng-djern; Maze, Guillaume; Mork, Kjell Arne; Morris, Tamaryn; Nagai, Takeyoshi; Nash, Jonathan; Garabato, Alberto Naveira; Olsen, Are; Pattabhi, Rama Rao; Prakash, Satya; Riser, Stephen; Schmechtig, Catherine; Schmid, Claudia; Shroyer, Emily; Sterl, Andreas; Sutton, Philip; Talley, Lynne; Tanhua, Toste; Thierry, Virginie; Thomalla, Sandy; Toole, John; Troisi, Ariel; Trull, Thomas W.; Turton, Jon; Velez-belchi, Pedro Joaquin; Walczowski, Waldemar; Wang, Haili; Wanninkhof, Rik; Waterhouse, Amy F.; Waterman, Stephanie; Watson, Andrew; Wilson, Cara; Wong, Annie P. S.; Xu, Jianping; Yasuda, Ichiro.
The Argo Program has been implemented and sustained for almost two decades, as a global array of about 4000 profiling floats. Argo provides continuous observations of ocean temperature and salinity versus pressure, from the sea surface to 2000 dbar. The successful installation of the Argo array and its innovative data management system arose opportunistically from the combination of great scientific need and technological innovation. Through the data system, Argo provides fundamental physical observations with broad societally-valuable applications, built on the cost-efficient and robust technologies of autonomous profiling floats. Following recent advances in platform and sensor technologies, even greater opportunity exists now than 20 years ago to (i)...
Tipo: Text Palavras-chave: Argo; Floats; Global; Ocean; Warming; Circulation; Temperature; Salinity.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00509/62043/66192.pdf
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Organic Carbon Export and Loss Rates in the Red Sea ArchiMer
Kheireddine, Malika; Dall'Olmo, Giorgio; Ouhssain, Mustapha; Krokos, George; Claustre, Hervé; Schmechtig, Catherine; Poteau, Antoine; Zhan, Peng; Hoteit, Ibrahim; Jones, Burton H..
The export and fate of organic carbon in the mesopelagic zone are still poorly understood and quantified due to lack of observations. We exploited data from a biogeochemical‐Argo float that was deployed in the Red Sea to study how a warm and hypoxic environment can affect the fate of the organic carbon in the ocean's interior. We observed that only 10% of the particulate organic carbon (POC) exported survived at depth due to remineralization processes in the upper mesopelagic zone. We also found that POC exported was rapidly degraded in a first stage and slowly in a second one, which may be dependent on the palatability of the organic matter. We observed that apparent oxygen utilization (AOU)‐based loss rates (a proxy of the remineralization of total...
Tipo: Text Palavras-chave: Carbon export; Carbon loss rates; Mesopelagic zone; Temperature; Oxygen; Tropical ecosystem.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00655/76730/77877.pdf
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Processing Argo measurement timing information at the DAC level ArchiMer
Bittig, Henry C.; Schmechtig, Catherine; Rannou, Jean-philippe; Poteau, Antoine.
Thermal lag or sensor time response corrections (e.g., [1]) require knowledge of the time of each individual sensor observation. In the Argo data system, the float's trajectory file is the natural place to put measurement timing information. Historically, only few levels of a float's profile have been timed, and DACs stored these sparse timed levels of the float profile in the trajectory already. Depending on the DAC, all measured paramters are stored with the timing information, or just the PRES variable is stored together with the time. With the need to have all observations timed, this approach leads to the following problems: a) With all parameters stored together with the timing information and put into the trajectory file, the trajectory file in...
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Ano: 2017 URL: http://archimer.ifremer.fr/doc/00369/47998/48031.pdf
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Processing BGC-Argo CDOM concentration at the DAC level ArchiMer
Schmechtig, Catherine; Organelli, Emanuele; Poteau, Antoine; Claustre, Hervé; D'Ortenzio, Fabrizio.
In the open ocean, Colored Dissolved Organic Matter (CDOM) is the fraction of the total Dissolved Organic Matter (DOM), composed by a mixture of chemically complex algal degradation products that interact with light. CDOM absorbs solar radiation in the UV and visible ranges (Bricaud et al., 1981) and, if illuminated, re-emits light as fluorescence (i.e., FDOM; Coble 1996). These optical measurements can be used as proxies of CDOM concentration. Whereas CDOM absorption measurements are given by the entire pool of the organic matter, FDOM measurements detect only sub-fractions. Depending on excitation and emission wavelengths of the fluorometer, FDOM can represent the fresh-material produced by microbial degradation of phytoplankton cells and/or from...
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Ano: 2017 URL: http://archimer.ifremer.fr/doc/00434/54541/55910.pdf
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Processing BGC-Argo Radiometric data at the DAC level ArchiMer
Schmechtig, Catherine; Poteau, Antoine; Claustre, Herve; D’ortenzio, Fabrizio.
Presently, radiometers can be implemented on profiling floats to estimate some radiometric measurements. Hereafter we briefly describe the principle of this method and several configurations of the OCR500 series instruments. These measurements can be radiance or irradiance at different wavelengths and in different directions (upward or downward). The Photosynthetically Available Radiation (PAR) is also measured as it represents the solar radiation that photosynthetic organisms are able to use in the process of photosynthesis. At the moment all radiometric sensors implemented on floats are developed by the Satlantic Company and are of the OCR serie. These radiometers combine three wavelengths for irradiance measurements together with a measurement of the...
Tipo: Text Palavras-chave: Argo; Bgc-argo; Optic.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00404/51541/52133.pdf
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Processing bio-Argo chlorophyll-A concentration at the DAC level ArchiMer
Schmechtig, Catherine; Poteau, Antoine; Claustre, Hervé; D'Ortenzio, Fabrizio; Boss, Emmanuel.
This document does NOT address the issue of chlorophyll-a quality control (either real-time or delayed mode). As a preliminary step towards that goal, this document seeks to ensure that all countries deploying floats equipped with chlorophyll-a sensors document the data and metadata related to these floats properly. We produced this document in response to action item 3 from the first Bio-Argo Data Management meeting in Hyderabad (November 12-13, 2012). If the recommendations contained herein are followed, we will end up with a more uniform set of chlorophyll-a data within the Bio-Argo data system, allowing users to begin analyzing not only their own chlorophyll-a data, but also those of others, in the true spirit of Argo data sharing.
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Ano: 2015 URL: https://archimer.ifremer.fr/doc/00283/39468/37945.pdf
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